>When one tests mufflers, can you be sure that >the flow with hot, pulsing exhaust gas will be >the same as a cool, steady flow of air? Or at >least comparable from one muffler to another?
No it isn't the same, but at least it gives you a point of reference. The exact same question could be asked of Cylinder head flow testing (but rarely is!). The question is even more relevant with headers. The whole idea behind equal length tube headers is to keep the pulses of each cylinder spread out, and not allowing two to crowd into the same pipe at the same time. Static flow testing will never show this. It will also never show the true difference between shorties and long tube headers. And what's true of the exhaust is equally true of the intake manifold ports.
On the other hand, there is no black magic here. Given some time and computer horsepower it can all be simulated, although it's sometimes faster, easier and cheaper to build it and measure!
As always, YMMV! Cheers,